PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G08220.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 532aa MW: 54214.3 Da PI: 9.4342

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G08220.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.6e-32	325	378	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ ONIVA09G08220.1 325 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 378 9****************************************************7 PP
2	Myb_DNA-binding	46.1	1.1e-14	326	377	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ ONIVA09G08220.1 326 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 377 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MAMVRELELM TSWSNSMGRH RYPTRILVDS FGHKYSASDK GVRTSCSIRA PLQGRGSFRR 60 GANICFGSLP SSAAVATSGG GRGGGGVVVG GGGGDPWRRL DGSTASTELS LSPPPAQAAG 120 GGGGGGGADA LPWRHRPSPP SSAVATTSAA AAAALMAPMM LQPLDAGGGA SAPPPPIRGI 180 PIYNGPGGFP FLQPSPAAGD VGHHHHHHPK MGFYSSYHHP STWPSTSPSP LAAPPGAASS 240 PLDPTAAFLS SPHHRMLSAA SGRLNGMLSV SDTLRSYGVP GAAAPGVIGG AHHHHHHLHG 300 GQPFVGALAS RFMPKLPAKR SMRAPRMRWT STLHARFVHA VELLGGHERA TPKSVLELMD 360 VKDLTLAHVK SHLQMYRTVK STDKPAASSG PADGGSGDEE FAGGGQAASG GGDSMCLRGG 420 GGGGVAAAAF AEHGRSASEG AASSVGGGGG GDMDQSSAGN TSTTRWSNSS RDPWLSSNSC 480 NMDAHRSVGL SSPIENLEPC RSSSSQVSNH ELSSPSLEFT LGRPDWHGAD HD

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MAMVRELELM TSWSNSMGRH RYPTRILVDS FGHKYSASDK GVRTSCSIRA PLQGRGSFRR  60
GANICFGSLP SSAAVATSGG GRGGGGVVVG GGGGDPWRRL DGSTASTELS LSPPPAQAAG  120
GGGGGGGADA LPWRHRPSPP SSAVATTSAA AAAALMAPMM LQPLDAGGGA SAPPPPIRGI  180
PIYNGPGGFP FLQPSPAAGD VGHHHHHHPK MGFYSSYHHP STWPSTSPSP LAAPPGAASS  240
PLDPTAAFLS SPHHRMLSAA SGRLNGMLSV SDTLRSYGVP GAAAPGVIGG AHHHHHHLHG  300
GQPFVGALAS RFMPKLPAKR SMRAPRMRWT STLHARFVHA VELLGGHERA TPKSVLELMD  360
VKDLTLAHVK SHLQMYRTVK STDKPAASSG PADGGSGDEE FAGGGQAASG GGDSMCLRGG  420
GGGGVAAAAF AEHGRSASEG AASSVGGGGG GDMDQSSAGN TSTTRWSNSS RDPWLSSNSC  480
NMDAHRSVGL SSPIENLEPC RSSSSQVSNH ELSSPSLEFT LGRPDWHGAD HD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	86	GGGRGGGG
2	80	87	GGGRGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	6e-42	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G08220.1