PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G03730.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 492aa MW: 51810.6 Da PI: 6.5143

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G03730.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.4e-16	61	105	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT eE+ l+++a +++G W++I +++g ++t+ q++s+ qk+ ONIVA09G03730.1 61 REKWTDEEHRLFLEALQLHGRA-WRRIQEHIG-TKTAVQIRSHAQKF 105 789***************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MEMACLQGNA MATDENGADD RAGGESTVDH LRSHMNYGDM DLSGEEHVPK ARKPYTITKQ 60 REKWTDEEHR LFLEALQLHG RAWRRIQEHI GTKTAVQIRS HAQKFFSKVV RESSGSNTGS 120 GGASAAAAAA AIQIPPPRPK RKPAHPYPRK VDGAAKKHVP ALRQLEKPPL WMQSLSEQEE 180 GSPTSVLTAA QIGTEALGGG FSNNSSGSGS LAPSAAGTDE HVDGGGSPAS SVDREDGCLS 240 PSIPTAELAM QAPNTKMSIA TTDAKEASSE ASVFRLFGKS VVVKDSDQLH LLNGSNIATS 300 GSVERATRNI LVPSFAAAPE GSSSNPWPSS MQQFLYFLPR SDGFAAQPVM PWFSYNGSLP 360 CALFYPAAAA AAANQQCHRD SEGVEFRVSQ REGSLTGSNT ASSVVLGSSA AVPAAAAAAQ 420 NSDVAESRGQ GNSREAAASP RLTKCESSAS VTLLQRGFMP YKRCAAESEL LRSEAAGGEE 480 AVADGELTRL CL

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MEMACLQGNA MATDENGADD RAGGESTVDH LRSHMNYGDM DLSGEEHVPK ARKPYTITKQ  60
REKWTDEEHR LFLEALQLHG RAWRRIQEHI GTKTAVQIRS HAQKFFSKVV RESSGSNTGS  120
GGASAAAAAA AIQIPPPRPK RKPAHPYPRK VDGAAKKHVP ALRQLEKPPL WMQSLSEQEE  180
GSPTSVLTAA QIGTEALGGG FSNNSSGSGS LAPSAAGTDE HVDGGGSPAS SVDREDGCLS  240
PSIPTAELAM QAPNTKMSIA TTDAKEASSE ASVFRLFGKS VVVKDSDQLH LLNGSNIATS  300
GSVERATRNI LVPSFAAAPE GSSSNPWPSS MQQFLYFLPR SDGFAAQPVM PWFSYNGSLP  360
CALFYPAAAA AAANQQCHRD SEGVEFRVSQ REGSLTGSNT ASSVVLGSSA AVPAAAAAAQ  420
NSDVAESRGQ GNSREAAASP RLTKCESSAS VTLLQRGFMP YKRCAAESEL LRSEAAGGEE  480
AVADGELTRL CL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	6e-36	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G03730.1