PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G26190.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 530aa MW: 54940.1 Da PI: 9.1126

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G26190.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.3e-05	48	70	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H ONIVA08G26190.1 48 FVCEVCNKGFQREQNLQLHRRGH 70 89*******************88 PP
2	zf-C2H2	13.2	0.00026	124	146	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ ONIVA08G26190.1 124 WKCDKCNKRYAVQSDWKAHSKTC 146 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MAAASSAHYF GLGEPQMQQQ QQQPPLQNNA AAPVVALSPH TLLATNRFVC EVCNKGFQRE 60 QNLQLHRRGH NLPWKLKQKN PKETRRRVYL CPEPSCVHHD PSRALGDLTG IKKHYSRKHG 120 EKKWKCDKCN KRYAVQSDWK AHSKTCGTRE YRCDCGTLFS RRDSFITHRA FCDALAQESG 180 RIMPPMGAAL YAGAGAGMAI GGLTGMAASH QLQPFQDHSS AITTAANAAA QFDHLMATSS 240 AAAGSPAFRA AQPTSSSSSP FYLGGGGDDG QAHTSLLHGK PAFHGLMQLP EQQGSNGGGL 300 LNLSYFSGGN GGHHHHHQEG RLVFPDQFNG VAAGNGARAG SGEHGNSGNN ADSGSIFSGN 360 MMGGGGGFSS LYSSSDQTVP PPQMSATALL QKAAQMGATT SSGGAGSVNS LLRGLGSGGG 420 GGALNGKPAG AAGFIMSGES SSRSTASQTA ENESQLRELM MNTLSATGGG TGAGTVFVGG 480 GFPGVDDGKL STRDFLGVSG GAPGLQLRHG GAAGMGMAGS LDQEMKWINW

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MAAASSAHYF GLGEPQMQQQ QQQPPLQNNA AAPVVALSPH TLLATNRFVC EVCNKGFQRE  60
QNLQLHRRGH NLPWKLKQKN PKETRRRVYL CPEPSCVHHD PSRALGDLTG IKKHYSRKHG  120
EKKWKCDKCN KRYAVQSDWK AHSKTCGTRE YRCDCGTLFS RRDSFITHRA FCDALAQESG  180
RIMPPMGAAL YAGAGAGMAI GGLTGMAASH QLQPFQDHSS AITTAANAAA QFDHLMATSS  240
AAAGSPAFRA AQPTSSSSSP FYLGGGGDDG QAHTSLLHGK PAFHGLMQLP EQQGSNGGGL  300
LNLSYFSGGN GGHHHHHQEG RLVFPDQFNG VAAGNGARAG SGEHGNSGNN ADSGSIFSGN  360
MMGGGGGFSS LYSSSDQTVP PPQMSATALL QKAAQMGATT SSGGAGSVNS LLRGLGSGGG  420
GGALNGKPAG AAGFIMSGES SSRSTASQTA ENESQLRELM MNTLSATGGG TGAGTVFVGG  480
GFPGVDDGKL STRDFLGVSG GAPGLQLRHG GAAGMGMAGS LDQEMKWINW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	2e-96	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G26190.1