PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G22660.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 655aa MW: 68155.6 Da PI: 9.6825

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G22660.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.5	1.7e-09	30	62	4	37
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtl 37 W t Ed+ll++av ++G+ +W+++a++m+ R++ ONIVA08G22660.1 30 WGTSEDLLLACAVSRHGTASWDAVAKEMQ-SRCP 62 9****************************.9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MTARSGDPGV SPESSSAAAA AAGSGGGEIW GTSEDLLLAC AVSRHGTASW DAVAKEMQSR 60 CPSAAVFTPT TCRLRFRVLH RRFSGGVTAE NEDADGGEEE EEPDAAAVAG WVEELRELRV 120 AELRREVEKY DLSIGSLQSK VKRLKEEREK SISGETKPPA AAAAVKEEEE DVRKGSPEEA 180 GAVEDRVSGH ESGRSCKESN SSDLKRPEND PAVADDDDRE AEEEEAAAAP AAGDIAVKEE 240 ASGESVAGSK EADAEKESSD VQSSASPSRR RRRKGGGGGE EAEAASPSVS VPLPAAEAEP 300 LVAFLESVRT SKAGAVFERR LDSQDGERYS GTIRRHVDLE TVRSRLVGAT AAAACYASAS 360 EFYRDMMLLC ANALVFFPRG SPEHAAALQL RALVSKQVSK DRQPHAGAKA PAAAAAEEKK 420 KPAKADADIA GPLLEKAPII VCRKRSSIAK AAAAAAKGEK AEKAETDKKE KDGSEEKKKA 480 AAAATTATAA ATAKDKKARG MRTNKSRGPA RNQKTAKLSE TGEGTKKSDK KGGGGGGSSS 540 AAAAAGGVAK KRNAVDFLNR MNQNGSPSTE RVSLLETLKL SAAATEQQKK SSSSSSGKGD 600 GRKEAGGSGS KKGAAASTPP GRRIGRPPKR AAAQPTPPPS KRAKDDKPTR KRGKK

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MTARSGDPGV SPESSSAAAA AAGSGGGEIW GTSEDLLLAC AVSRHGTASW DAVAKEMQSR  60
CPSAAVFTPT TCRLRFRVLH RRFSGGVTAE NEDADGGEEE EEPDAAAVAG WVEELRELRV  120
AELRREVEKY DLSIGSLQSK VKRLKEEREK SISGETKPPA AAAAVKEEEE DVRKGSPEEA  180
GAVEDRVSGH ESGRSCKESN SSDLKRPEND PAVADDDDRE AEEEEAAAAP AAGDIAVKEE  240
ASGESVAGSK EADAEKESSD VQSSASPSRR RRRKGGGGGE EAEAASPSVS VPLPAAEAEP  300
LVAFLESVRT SKAGAVFERR LDSQDGERYS GTIRRHVDLE TVRSRLVGAT AAAACYASAS  360
EFYRDMMLLC ANALVFFPRG SPEHAAALQL RALVSKQVSK DRQPHAGAKA PAAAAAEEKK  420
KPAKADADIA GPLLEKAPII VCRKRSSIAK AAAAAAKGEK AEKAETDKKE KDGSEEKKKA  480
AAAATTATAA ATAKDKKARG MRTNKSRGPA RNQKTAKLSE TGEGTKKSDK KGGGGGGSSS  540
AAAAAGGVAK KRNAVDFLNR MNQNGSPSTE RVSLLETLKL SAAATEQQKK SSSSSSGKGD  600
GRKEAGGSGS KKGAAASTPP GRRIGRPPKR AAAQPTPPPS KRAKDDKPTR KRGKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	1e-16	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G22660.1