PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G19930.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 275aa    MW: 29302.4 Da    PI: 5.7203
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G19930.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.8e-20131180255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+W+AeIrdp+    r  r +lg+f+taeeAa+a+++a+ +++g
  ONIVA08G19930.1 131 KYRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFDTAEEAARAYDRAAVEFRG 180
                      8********.**********82....48***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MGGNQEYMIR FDGHIDDASP SSATAEPPPP LPPPRPFAGR AISAEREHSV IVATLLHVIS  60
GYRTPPPEVF PAARAEVCGV CGMDQCLGCE FFAGESGVVS FDGAEKVAAA AAAAAAGAAA  120
GQRRRRKKKN KYRGVRQRPW GKWAAEIRDP RRAVRKWLGT FDTAEEAARA YDRAAVEFRG  180
PRAKLNFPFP EQLSAHDDSN GDASAAAKSD TLSPSPRSAD ADEQVEHTRW PQGGGGGGGG  240
GGGETGDQLW EGLQDLMQLD EGGLSWFPQS SDSWN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123129RRRRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-23ERF family protein