PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA08G15620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 422aa MW: 45295.7 Da PI: 4.7196 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62 | 8.9e-20 | 158 | 211 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe+++++ e+++eLA++lg+ rqV vWFqNrRa++k ONIVA08G15620.1 158 KKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWK 211 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 132.4 | 1.7e-42 | 157 | 248 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl++eqv++LE+sFeee+kLeperK+elar+Lg+ prqvavWFqnrRAR+ktkqlE+d+++Lk+aydal++++++L +++++Lr+++ ONIVA08G15620.1 157 EKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVI 248 69**************************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 422 aa Download sequence |
MGFSLYPMKT STRMLWSTSF FRHKPTPSRA AAASRRRSAR LVGARACVNG RAASRSGFLG 60 FLEKGGEEGE ESMDPGRVVF DSGVARRACP GGAQMLLFGG GGSANSGGFF RGVPAAVLGM 120 DESRSSSSAA GAGAKRPFFT THEELLEEEY YDEQAPEKKR RLTAEQVQML ERSFEEENKL 180 EPERKTELAR RLGMAPRQVA VWFQNRRARW KTKQLEHDFD RLKAAYDALA ADHHALLSDN 240 DRLRAQVISL TEKLQDKETS PSSATITTAA QEVDQPDEHT EAASTTGFAT VDGALAAPPP 300 GHQQPPHKDD LVSSGGTNDD GDGGGAAVVV FDVTEGANDR LSCESAYFAD AAEAYERDCA 360 GHYALSSEEE DGGAVSDEGC SFDLPDAAAA AAAMFGAAGV VHHDAADDEE AQLGSWTAWF 420 WS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 206 | 214 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 4e-44 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA08G15620.1 |