PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA08G11510.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NAC | ||||||||
Protein Properties | Length: 447aa MW: 49725.8 Da PI: 4.574 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 61.3 | 3.1e-19 | 9 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdke 91 l+pGf+F+P+de+lv+++L + +++ +++l + + d +v Pw+L ++ +++e++ yf +++d + r+ r+ + +g+W ++ +++ ONIVA08G11510.1 9 LTPGFKFEPSDEQLVQFFLLPYLRELPVPLGGLVIRDDPRSVPPWKLFaRNGRGDEEDAYFLAPADGEG----RQARTCDggRGRWITQRLERT 98 579***************************8888888**********8334445666779988887753....555543323899**9999998 PP NAM 92 vlsk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++v k+ L ++ g+ + g +t Wvmhey++ ONIVA08G11510.1 99 GNLRlaggggsGEAVVFEKHRLNYHAGEGRCG-STGWVMHEYAV 141 8887889888777789*********9999997.9********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 447 aa Download sequence |
MAAAKMAGLT PGFKFEPSDE QLVQFFLLPY LRELPVPLGG LVIRDDPRSV PPWKLFARNG 60 RGDEEDAYFL APADGEGRQA RTCDGGRGRW ITQRLERTGN LRLAGGGGSG EAVVFEKHRL 120 NYHAGEGRCG STGWVMHEYA VVKPAALGAR HRACHIAFTG HGQKRKRVPD GYVDVEDDGS 180 KASTNAAAAV PPSSTAAMSA CPSNVTYNQG CHISPEQSIE QHFPAEHNNI QIQQQAYYQS 240 QDHEQCQYSD EEKYLLQQIK QEQYYYNQQN CFLPGQGNQE LYYNDEQQQI FSLPEHQCSQ 300 EQYCHHDDQQ DCVLPEQHSQ ELHGYNNEEQ GYLLPPEPID QEEQALFVGG EPQHEQQPLT 360 STPRQALLDY DDGKLLPPVG VNGAIAIPPQ DAAVASNDDD GGQATEAPAA KMTAEEKKWF 420 MEELLTEGCW SGPLLFDQPY YGSALKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10500.1 | 3e-10 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA08G11510.1 |