PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G08030.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WOX

Protein Properties

Length: 284aa MW: 30183.6 Da PI: 7.0097

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G08030.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.6	1.4e-15	41	101	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++++eq+ +Le+ F++ +p ++e +++ + l + +++V++WFqNrR + ++ ONIVA08G08030.1 41 RSRWAPKPEQILILESIFNSgMVNPAKDETARIRRLLerfgAVRDANVFYWFQNRRSRSRR 101 89***************99***********************************997 PP
2	Wus_type_Homeobox	104.7	6e-34	40	102	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ar+RW+P+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++ ONIVA08G08030.1 40 ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQNRRSRSRRR 102 689**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MDRTATASWE VMSRRGEQQQ QLMMQAPASH NGGSGGGEPA RSRWAPKPEQ ILILESIFNS 60 GMVNPAKDET ARIRRLLERF GAVRDANVFY WFQNRRSRSR RRARQLQQAC GAALHQLPSA 120 AAAAGAGGGG GYYHHHHQPS SSPFLMHGGG GGGVVTSTTA APAVAASGHF LADEVDGGGD 180 DDLFAISRQM GLMARHGGGD HHYGSYADSD ATQLSYQPTG TIQVFINGVA YDVPSGGALD 240 MAGTFGRDAM LVHSSGEVLP VDEHGVLINS LQMGECYYLV SKSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	5e-33	WOX family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G08030.1