PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G03410.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 795aa MW: 86580.8 Da PI: 6.5529

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G03410.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.9	6.5e-15	81	125	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+ E+ ++++a k++G W +I +++g ++t+ q++s+ qk+ ONIVA08G03410.2 81 RERWTEAEHNRFLEALKLYGRA-WQRIEEHVG-TKTAVQIRSHAQKF 125 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 795 aa Download sequence
MQLLSRRRRG RRSEAASLVG IALLALEGDG AVGHSFGGGG ARIKEVFGLR RLTAIGSIQI 60 NSSGEEAVVK VRKPYTITKQ RERWTEAEHN RFLEALKLYG RAWQRIEEHV GTKTAVQIRS 120 HAQKFFTKLE KEAINNGTSP GQAHDIDIPP PRPKRKPNSP YPRKSCLSSE TSTREVQNDK 180 ATISNMTNNS TAQMAGDAAL EKLQRKEISE KGSCSEVLNL FREVPSASFS SVNKSSSNYG 240 ASRGLEPTKT EVKDVVILER DSISNGAGKD AKDINDQEME RLNGIHISSK PDHSHENCLD 300 TSSQQFKPKS NSVETTYVDW SAAKASHYQM DRNGVTGFQA TGTEGSHPDQ TSDQMGGASG 360 TMNQCIHPTL PVDPKFDGNA AAQPFPHNYA AFAPMMQCHC NQDAYRSFAN MSSTFSSMLV 420 STLLSNPAIH AAARLAASYW PTVDGNTPDP NQENLSESAQ GSHAGSPPNM ASIVAATVAA 480 ASAWWATQGL LPLFPPPIAF PFVPAPSAPF STADVQRAQE KDIDCPMDNA QKELQETRKQ 540 DNSEAMKVIV SSETDESGKG EVSLHTELKI SPADKADTKP AAGAETSDVF GNKKKQDRSS 600 CGSNTPSSSD IEADNAPENQ EKANDKAKQA SCSNSSAGDN NHRRFRSSAS TSDSWKEVSE 660 EVVVYQHSAY SHLSYSLNIL HCFSNSHFCC QGRLAFDALF SRERLPQSFS PPQVEGSKEI 720 SKEEEDEVTT VTVDLNKNAA IIDQELDTAD EPRASFPNEL SNLKLKSRRT GFKPYKRCSV 780 EAKENRVPAS DEISA

Sequence ? help Back to Top

Protein Sequence Length: 795 aa Download sequence

MQLLSRRRRG RRSEAASLVG IALLALEGDG AVGHSFGGGG ARIKEVFGLR RLTAIGSIQI  60
NSSGEEAVVK VRKPYTITKQ RERWTEAEHN RFLEALKLYG RAWQRIEEHV GTKTAVQIRS  120
HAQKFFTKLE KEAINNGTSP GQAHDIDIPP PRPKRKPNSP YPRKSCLSSE TSTREVQNDK  180
ATISNMTNNS TAQMAGDAAL EKLQRKEISE KGSCSEVLNL FREVPSASFS SVNKSSSNYG  240
ASRGLEPTKT EVKDVVILER DSISNGAGKD AKDINDQEME RLNGIHISSK PDHSHENCLD  300
TSSQQFKPKS NSVETTYVDW SAAKASHYQM DRNGVTGFQA TGTEGSHPDQ TSDQMGGASG  360
TMNQCIHPTL PVDPKFDGNA AAQPFPHNYA AFAPMMQCHC NQDAYRSFAN MSSTFSSMLV  420
STLLSNPAIH AAARLAASYW PTVDGNTPDP NQENLSESAQ GSHAGSPPNM ASIVAATVAA  480
ASAWWATQGL LPLFPPPIAF PFVPAPSAPF STADVQRAQE KDIDCPMDNA QKELQETRKQ  540
DNSEAMKVIV SSETDESGKG EVSLHTELKI SPADKADTKP AAGAETSDVF GNKKKQDRSS  600
CGSNTPSSSD IEADNAPENQ EKANDKAKQA SCSNSSAGDN NHRRFRSSAS TSDSWKEVSE  660
EVVVYQHSAY SHLSYSLNIL HCFSNSHFCC QGRLAFDALF SRERLPQSFS PPQVEGSKEI  720
SKEEEDEVTT VTVDLNKNAA IIDQELDTAD EPRASFPNEL SNLKLKSRRT GFKPYKRCSV  780
EAKENRVPAS DEISA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	3e-40	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G03410.2