PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G02810.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 383aa    MW: 40182.2 Da    PI: 8.9696
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G02810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.99.8e-13104148347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W++eE+++++ +  +lG+g+W+ I+r     Rt+ q+ s+ qky
  ONIVA08G02810.1 104 AWSEEEHKKFLLGLSKLGKGDWRGISRNYVGSRTPTQVASHAQKY 148
                      7**************************9988*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MTRDGAPPAS GGGGAAEGPR RCSQCGHHGH NARTCTARGP VKLFGVRIGD KPPTAAAGGG  60
GGMRKSASMG SLAQLAEGGG GGGGREEGYG SDGNDDKRRK RGEAWSEEEH KKFLLGLSKL  120
GKGDWRGISR NYVGSRTPTQ VASHAQKYFI RQTNVHRRKR RSSLFDMVID DSDDQPLSRT  180
SSQEVEVEEN LEDGHPVTAP VIPPAPVPML SSSLVPPPVP AMAPVAPGPV LTSASATLPV  240
SAVAPQTDEK EQVASGSNTT ETGAAIPEVM PPYGYPMMLP PYYPPAFVPM PYYGYVPVFY  300
APPGAVQAQH EVVKPVAVHS KPPVHIDELY SMSELSLKGE AGVKNGTPNS PLPPRPIGRP  360
DRQSAFHGKG PSDGSSNGLI PAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.12e-41MYB_related family protein