PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G01130.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 345aa    MW: 37392 Da    PI: 10.4327
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G01130.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.72e-52111391128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                      +ppGfrFhPt+eel+++yL+kkv++++++l +vi++vd++k+ePwd+++  k+ +  +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk+
  ONIVA08G01130.1  11 VPPGFRFHPTEEELLNYYLRKKVASEQIDL-DVIRDVDLNKLEPWDIQErcKIGSgPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKA 103
                      69****************************.9***************963444443456*********************************** PP

              NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++   + +g++ktLvfykgrap+g+k+dW+mheyrl
  ONIVA08G01130.1 104 IYN-AVHRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139
                      ***.8899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MSISVNGQSC VPPGFRFHPT EEELLNYYLR KKVASEQIDL DVIRDVDLNK LEPWDIQERC  60
KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKAIYNAVHR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD DPATDTAAAT PTVTSAAAAA AAMAAAADGG QEDGWVVCRV  180
FKKKHHHKEA GGGGGKHGGD GSAGAKAAHA YSSSDDALDQ ILQYMGRSCK QEHELPSPQA  240
SGGGGAGAGS RPASRYLRPI DTVLGGHGFM KLPPLARPTT SSASTPPTTT ASPTTPPPPR  300
GCSVVPTPAP TTTCGASRGR LRRHRRRRRR RRPRQSVSAT WHCNT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1320332RLRRHRRRRRRRR
2322329RRHRRRRR
3322330RRHRRRRRR
4322331RRHRRRRRRR
5323334RHRRRRRRRRPR
6323332RRHRRRRRRR
7325332RRHRRRRR
8325330RRRRRR
9325331RRRRRRR
10325332RRRRRRRR
11326333RRHRRRRR
12326331RRRRRR
13326332RRRRRRR
14326333RRRRRRRR
15327332RRRRRR
16327334RRRRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.13e-88NAC family protein