PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G19900.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 323aa MW: 34233.9 Da PI: 5.5578

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G19900.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	110	132	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F ++ + H+r+H ONIVA07G19900.1 110 FPCHLCHKEFGSRKAVHGHMRVH 132 89********************6 PP
2	zf-C2H2	11.6	0.00085	216	238	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk +++ L H r+H ONIVA07G19900.1 216 HPCNVCGKEYPTGVALGGHKRKH 238 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MEGKSSSRHA DPLEEVEMNS ASETEDDDDC RYVIQSRRDN DNDDEEGMRP ATACKRRRRL 60 DDILALLPSP PTLSTSSGSE GTISDRDHGG DVIRAGDDAD PVAARQEASF PCHLCHKEFG 120 SRKAVHGHMR VHHAENEKVP LPPPPPPAAM PVLPQARLPA PGASRSGGPY KCKYEGCNME 180 YKTHQGLGGH VAGHINRDKM ATASGSGGAG KPEGKHPCNV CGKEYPTGVA LGGHKRKHYR 240 KDLDLTLSLA PPGELAAPPT PAPAPAAIAA VEAEAEVAED GDGGEPVPTT LSTGARRNVV 300 VRIWGVDVEK PVDDVEEQDG GSN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	55	60	KRRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46090.1	4e-12	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G19900.1