PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G18840.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 598aa    MW: 64168.8 Da    PI: 5.6196
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G18840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS314.13e-961895972374
             GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfs 94 
                       +lLlecA+ v+++d +++q+l++ l+elasp+gd  q+la+yf+++L arl+ s++++ ++l++ +++++ s +++  + l f+e+sP+  f+
  ONIVA07G18840.1 189 SQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGQRTLRTLAAASDRNT-SFDSTRRTALrFQELSPWSSFG 281
                      589************************************************************99888744.44444444446*********** PP

             GRAS  95 hltaNqaIleavege........ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.....skeeleetgerLakfAeelgv 174
                      h++aN aIle++ +         +r Hi+D++ + ++QWp+Ll+aLa+R+ +++p+l iT+v+s++++      ++ ++e+g+r++kfA+ +gv
  ONIVA07G18840.1 282 HVAANGAILESFLEVaaaassetQRFHILDLSNTFCTQWPTLLEALATRSaDETPHLSITTVVSAAPSaptaaVQRVMREIGQRMEKFARLMGV 375
                      **********8754434455567999************************8889**********988889999999****************** PP

             GRAS 175 pfefnvlvak.rledleleeLrvkp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nse............ 251
                      pf+f++++++ +l++l+l++L++++     alaVn+v +l  ++  ++  + +rd++   +++l P+vv+vve+ead+   +            
  ONIVA07G18840.1 376 PFRFRAVHHSgDLAELDLDALDLREggaTTALAVNCVNSLRGVV--PGRAR-RRDAFAASLRRLDPRVVTVVEEEADLvA-Sdpdassateegg 465
                      *******8888**************888889************9..55555.59***********************954.44899******** PP

             GRAS 252 ....sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll 341
                           Fl+ f e l+++sa +dsle+++p++s+er  +Er   gr+iv++v+c  +e+ er+et+++W +r+++aGF+pv++se++a+++++ll
  ONIVA07G18840.1 466 dteaAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERG-AGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLL 558
                      *****************************************.**************************************************** PP

             GRAS 342 rkvksdgyrveee.......sgslvlgWkdrpLvsvSaWr 374
                      r++  +g+++ e         + ++l Wk++pLv++SaWr
  ONIVA07G18840.1 559 RRYR-EGWSMREAgtddsaaGAGVFLAWKEQPLVWASAWR 597
                      ****.88888866666666455566**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 598 aa     Download sequence    
MDTLFRLVSL QAASEQQQSA SYNSRSTTSS GSRSSSHQTN ASYSYYHHSS NSGGGGGGGG  60
GYYYGGQQPP PSQYYYLEPY QEECGNAPHH QLYMDEDFSS SSSSRHFHHG APVQQQQPPA  120
SSTPTGTAPT PPLSTSSTAA GAGHGLFEAA DLSFPPDLNL DFSSPASSSG GGTASSGAVG  180
GGGGGRWASQ LLLECARSVA ARDSQRVQQL MWMLNELASP YGDVEQKLAS YFLQGLFARL  240
TASGQRTLRT LAAASDRNTS FDSTRRTALR FQELSPWSSF GHVAANGAIL ESFLEVAAAA  300
SSETQRFHIL DLSNTFCTQW PTLLEALATR SADETPHLSI TTVVSAAPSA PTAAVQRVMR  360
EIGQRMEKFA RLMGVPFRFR AVHHSGDLAE LDLDALDLRE GGATTALAVN CVNSLRGVVP  420
GRARRRDAFA ASLRRLDPRV VTVVEEEADL VASDPDASSA TEEGGDTEAA FLKVFGEGLR  480
FFSAYMDSLE ESFPKTSNER LALERGAGRA IVDLVSCPAS ESMERRETAA SWARRMRSAG  540
FSPVAFSEDV ADDVRSLLRR YREGWSMREA GTDDSAAGAG VFLAWKEQPL VWASAWRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-145GRAS family protein