PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G18580.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 617aa MW: 66019.4 Da PI: 6.3317

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G18580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.2	6.3e-32	236	293	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C vkk +ers d++++e++Y+g+Hnh+k ONIVA07G18580.1 236 EDGYNWRKYGQKHVKGSENPRSYYKCTHPNCDVKKLLERSL-DGQITEVVYKGRHNHPK 293 8**************************************.*************85 PP
2	WRKY	106.4	1.5e-33	409	467	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++dpk v++tYeg+Hnhe ONIVA07G18580.1 409 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNTGCPVRKHVERASHDPKSVITTYEGKHNHE 467 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MADSPNPSSG DHPAGVGGSP EKQPPVDRRV AALAAGAAGA GARYKAMSPA RLPISREPCL 60 TIPAGFSPSA LLESPVLLTN FKVEPSPTTG TLSMAAIMNK SANPDILPSP RDKTSGSTHE 120 DGGSRDFEFK PHLNSSSQST ASAINDPKKH ETSMKNESLN TAPSSDDMMI DNIPLCSRES 180 TLAVNVSSAP SQLVGMVGLT DSSPAEVGTS ELHQMNSSGN AMQESQPESV AEKSAEDGYN 240 WRKYGQKHVK GSENPRSYYK CTHPNCDVKK LLERSLDGQI TEVVYKGRHN HPKPQPNRRL 300 SAGAVPPIQG EERYDGVATT DDKSSNVLSI LGNAVHTAGM IEPVPGSASD DDNDAGGGRP 360 YPGDDAVEDD DLESKRRKME SAAIDAALMG KPNREPRVVV QTVSEVDILD DGYRWRKYGQ 420 KVVKGNPNPR SYYKCTNTGC PVRKHVERAS HDPKSVITTY EGKHNHEVPA SRNASHEMST 480 PPMKPVVHPI NSNMQGLGGM MRACEPRTFP NQYSQAAESD TISLDLGVGI SPNHSDATNQ 540 LQSVSDQMQY QMQPMGSVYS NMGLPAMAMP TMAGNAASSI YGSREEKPSE GFTFKATPMD 600 HSANLCYSTA GNLVMGP

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MADSPNPSSG DHPAGVGGSP EKQPPVDRRV AALAAGAAGA GARYKAMSPA RLPISREPCL  60
TIPAGFSPSA LLESPVLLTN FKVEPSPTTG TLSMAAIMNK SANPDILPSP RDKTSGSTHE  120
DGGSRDFEFK PHLNSSSQST ASAINDPKKH ETSMKNESLN TAPSSDDMMI DNIPLCSRES  180
TLAVNVSSAP SQLVGMVGLT DSSPAEVGTS ELHQMNSSGN AMQESQPESV AEKSAEDGYN  240
WRKYGQKHVK GSENPRSYYK CTHPNCDVKK LLERSLDGQI TEVVYKGRHN HPKPQPNRRL  300
SAGAVPPIQG EERYDGVATT DDKSSNVLSI LGNAVHTAGM IEPVPGSASD DDNDAGGGRP  360
YPGDDAVEDD DLESKRRKME SAAIDAALMG KPNREPRVVV QTVSEVDILD DGYRWRKYGQ  420
KVVKGNPNPR SYYKCTNTGC PVRKHVERAS HDPKSVITTY EGKHNHEVPA SRNASHEMST  480
PPMKPVVHPI NSNMQGLGGM MRACEPRTFP NQYSQAAESD TISLDLGVGI SPNHSDATNQ  540
LQSVSDQMQY QMQPMGSVYS NMGLPAMAMP TMAGNAASSI YGSREEKPSE GFTFKATPMD  600
HSANLCYSTA GNLVMGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-125	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G18580.1