PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G21640.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 263aa    MW: 27152.4 Da    PI: 4.5813
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G21640.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.3e-185096252
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52
                      y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++aa++ 
  ONIVA06G21640.1 50 TYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDAAALV 96
                     69****998.**********843...6*********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MPEYELAACS PASPSSSASS TSTPPSPGGE AAARCGEKRG RGGGGGRHPT YRGVRMRAWG  60
KWVSEIREPR KKSRIWLGTF PTPEMAARAH DAAALVVKGP AAVLNFPGAA ASLPRPASAA  120
PRDVQAAAAR AAAMALDAVV PAPPSPPPPL MPPQASPSEA ARAHALVAQV DQDDDEEELE  180
EIVELPPIDE LDAAAELVFA SSGATTFHYD PAADQPWYDQ PAACLQDGGG GGIAVHDALG  240
FELDHVWADG VVASGFGALL WNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.17e-27ERF family protein