PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G20210.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 342aa    MW: 36416.4 Da    PI: 4.6277
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G20210.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22.1e-18120170256
              AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                      +++GVr ++ +g++ AeIr+      +++r++lg+f+taeeAa+ +++a+++l+g+
  ONIVA06G20210.1 120 KFRGVRKRP-WGKYGAEIRV----SqQSARVWLGTFDTAEEAARVYDHAALRLRGP 170
                      89*******.**********....3245**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MVEVIVEKKA RRIVRGRWHV EASNEAAAAA PAVAAPAPRV VRVLCRDHDA TDSSGDDDGE  60
DDAPRRARLL VHEIHVARQP VAMSPAAASS SQRRRVGPMK RTESAVDATM DATAAAPERK  120
FRGVRKRPWG KYGAEIRVSQ QSARVWLGTF DTAEEAARVY DHAALRLRGP SATTNFPVTP  180
AAPSPPPSRA TYAGAASGYD ESSDESQLVG SPVSVLRPMP ARATAKKEAK EEDDSAPDIL  240
GISAGDGLIS PFTCDVLNFS PPDEDMFGGG ISFGEPTPPP MVFDDDCMAR LGHAPNDDEH  300
PVTSSSFLDG DLGDLPSWTE VDGFFSDVGG DDLFAAEPFP AL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-25ERF family protein