PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G16260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ZF-HD | ||||||||
Protein Properties | Length: 214aa MW: 22092.8 Da PI: 6.4241 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 49.1 | 1.4e-15 | 61 | 111 | 4 | 53 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFH 53 ++Y+eC kNhAaslGgh + + g e +++++l CaACgCH nFH ONIVA06G16260.1 61 TVYQECPKNHAASLGGHGAGRLRGVHAVVGGEpADPTSLMCAACGCHCNFH 111 78****************999999999888888****************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MKLSTFATAA AAAADRSRGG GGKHGVRAAS CVGATGGVIA GDMAEVELLR RAQPAVGGGE 60 TVYQECPKNH AASLGGHGAG RLRGVHAVVG GEPADPTSLM CAACGCHCNF HCWLLEGSPP 120 PPPPLALPGP PMPANVLHGQ LHREEETPEV RLPRVDGDES DNNSDGSEYY DERSVSPPSP 180 PHLPAPVVHQ PYYPSAQHML LSLGSSGQAQ RLPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69600.1 | 7e-10 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA06G16260.1 |