PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G15050.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 321aa MW: 35244.3 Da PI: 9.0757

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G15050.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.9	9.7e-13	177	221	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT+eE+ l+ + + +G g+Wk I++++ ++Rt+ q+ s+ qk+ ONIVA06G15050.1 177 IWTEEEHRLFMVGLRVFGRGDWKNISKHLVTTRTAAQVSSHAQKF 221 6******************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MGSIVIEGWT ASEIEEARSL ITSPNNGGEG GDGEGNKQKH CGHIVMELHE WFPWKTIGQV 60 IGLYMKLNAG KPMVMHSLNK SDANNSIGEV DHVSALANGN PVRLEEHRPM LNNVGLVFDY 120 PLEEMEMENQ TDQEPKMVVE EEVQPKEGLV IKEKEAGVSK IHTNSQHVTP SIKRRVIWTE 180 EEHRLFMVGL RVFGRGDWKN ISKHLVTTRT AAQVSSHAQK FFLKMEARGE AVPPPAKRRR 240 RRITGDQQAA AAEHAAALRR RMPVPPPPFN PFLLPSLVAP VMHRLLPPGS QAAGAAASGS 300 GGQGASLPQM PWINGANGMG R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	242	KRRRRR
2	237	243	KRRRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58900.1	2e-18	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G15050.1