PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G13690.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 722aa MW: 82425 Da PI: 10.0897

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G13690.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.8	4.4e-07	507	547	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE e++ + v++ G+ W + a+++g +++ ++k+ w+ ONIVA06G13690.1 507 KWTPEEYEKIRRHVEKNGTS-WISLAQELG--KSEIHLKDTWRR 547 8***************99.****8..9*****9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 722 aa Download sequence
MWKRALGLDF RGSKAAPLAP LSRRPSPSPA IRRSSAVSQR RRTARRHPAP SRGSSLPGWS 60 PRARRTHSSS APRAVTPTMG GEGAERRSKK KEKGKRQEEK AESGSRGDGE AVKLDLATDF 120 PSNSMGKVAM DVEEAKEVHR RKKRKEKEKE KEKDHGKEKK NKVIADNIEE ACAEAEQAEA 180 SGLKVEQHCS EHVQGDMSKC GSEEDKSIKK DNKLMKKKKK KKERKVEMAE EGQILAGSTD 240 ENAGLLHAEM GSGEKEQGKK SKKSKRKHED GEPVADGSAS DEIMTNRDKK RRRKEHSVEL 300 KEGDQVNISK KAVKIKGNKK RKNESDKFNP DLSTDALTGE DKVGGDGKND KRKKKNDTST 360 RRNEVGRDDK NDKKKKKSKE RNGGRKGEKE KAAQSKDKVR RVSFSDAVEV FSINDGEDED 420 NGKSAESEVV HGKRFTPEEN ATLMEAIMSY IEMKQLGENG LEMIRACSKH PELKGCWAEI 480 GKSLPHRPLT AIYKRARILL YRSDERKWTP EEYEKIRRHV EKNGTSWISL AQELGKSEIH 540 LKDTWRRIKP KNLKSVARFC ISIKWKDSLQ SQWTQDEYQN LFDLVNLDLR MKAHQEYDAG 600 NRKLRDNIAW EAISDKLTTR NHKNCCLKWY YQLASPLVQK GIWADTDDYR LVEALQNVDA 660 VCVEDIDWDN LLDHRSGEVC RQRWNEMVRY LGGHKEKPFI EQVEVLSKRY CPEMVDYREG 720 EA

Sequence ? help Back to Top

Protein Sequence Length: 722 aa Download sequence

MWKRALGLDF RGSKAAPLAP LSRRPSPSPA IRRSSAVSQR RRTARRHPAP SRGSSLPGWS  60
PRARRTHSSS APRAVTPTMG GEGAERRSKK KEKGKRQEEK AESGSRGDGE AVKLDLATDF  120
PSNSMGKVAM DVEEAKEVHR RKKRKEKEKE KEKDHGKEKK NKVIADNIEE ACAEAEQAEA  180
SGLKVEQHCS EHVQGDMSKC GSEEDKSIKK DNKLMKKKKK KKERKVEMAE EGQILAGSTD  240
ENAGLLHAEM GSGEKEQGKK SKKSKRKHED GEPVADGSAS DEIMTNRDKK RRRKEHSVEL  300
KEGDQVNISK KAVKIKGNKK RKNESDKFNP DLSTDALTGE DKVGGDGKND KRKKKNDTST  360
RRNEVGRDDK NDKKKKKSKE RNGGRKGEKE KAAQSKDKVR RVSFSDAVEV FSINDGEDED  420
NGKSAESEVV HGKRFTPEEN ATLMEAIMSY IEMKQLGENG LEMIRACSKH PELKGCWAEI  480
GKSLPHRPLT AIYKRARILL YRSDERKWTP EEYEKIRRHV EKNGTSWISL AQELGKSEIH  540
LKDTWRRIKP KNLKSVARFC ISIKWKDSLQ SQWTQDEYQN LFDLVNLDLR MKAHQEYDAG  600
NRKLRDNIAW EAISDKLTTR NHKNCCLKWY YQLASPLVQK GIWADTDDYR LVEALQNVDA  660
VCVEDIDWDN LLDHRSGEVC RQRWNEMVRY LGGHKEKPFI EQVEVLSKRY CPEMVDYREG  720
EA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	146	RRKKRKE
2	140	147	RRKKRKEK
3	141	147	RRKKRKE
4	141	148	RRKKRKEK
5	216	222	KKKKKKK
6	217	225	KKKKKKERK
7	221	263	KKERKVEMAEEGQILAGSTDENAGLLHAEMGSGEKEQGKKSKK
8	289	331	KKERKVEMAEEGQILAGSTDENAGLLHAEMGSGEKEQGKKSKK
9	289	294	KKRRRK
10	289	314	KKRRRKEHSVELKEGDQVNISKKAVK
11	289	316	KKRRRKEHSVELKEGDQVNISKKAVKIK
12	290	332	KKERKVEMAEEGQILAGSTDENAGLLHAEMGSGEKEQGKKSKK
13	290	315	KKRRRKEHSVELKEGDQVNISKKAVK
14	290	317	KKRRRKEHSVELKEGDQVNISKKAVKIK
15	291	318	KKRRRKEHSVELKEGDQVNISKKAVKIK
16	351	376	KKRRRKEHSVELKEGDQVNISKKAVK
17	351	378	KKRRRKEHSVELKEGDQVNISKKAVKIK
18	352	379	KKRRRKEHSVELKEGDQVNISKKAVKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-94	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G13690.1