PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G05580.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

ERF

Protein Properties

Length: 496aa MW: 54404 Da PI: 8.6065

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G05580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.8	7.6e-15	55	105	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVrw+ grWv+ +r+p g + rf++g+ +taee a+ ++aa+++l g ONIVA06G05580.1 55 FRGVRWRGCAGRWVCKVRVP---GsRGDRFWIGTSDTAEETARTHDAAMLALCG 105 8****************9...5445*********************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MILVELLLSS YVAHVMEKNT AASGQLMTSS AEATPSSLKR PAGRTKFQET RHLVFRGVRW 60 RGCAGRWVCK VRVPGSRGDR FWIGTSDTAE ETARTHDAAM LALCGASASL NFADSAWLLH 120 VPRAPVVSGL RPLAARCATR CLQGHRRVPA PGRGSTATAT ATSGDAASTA PPSAPVLSAK 180 QCEFIFLSSL DFHMLFSHSS AALYKPREAS LPRRRSQSGD PRRARDRSKL LHRSHDMAEA 240 ASAAAAATTE QANGSSGGEQ KTRHSEVGHK SLLKSDDLYQ YILETSVYPR EHECMKELRE 300 VTANHPWNLM TTSADEGQFL NLLLKLIGAK KTMEIGVYTG YSLLATALAI PDDGTILAMD 360 INRENYELGL PSIEKAGVAH KIDFREGPAL PVLDQLVEEE GNHGSFDFVF VDADKDNYLN 420 YHERLMKLVK VGGLVGYDNT LWNGSVVLPA DAPMRKYIRY YRDFVLELNK ALAADHRVEI 480 CQLPVGDGIT LCRRVK

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MILVELLLSS YVAHVMEKNT AASGQLMTSS AEATPSSLKR PAGRTKFQET RHLVFRGVRW  60
RGCAGRWVCK VRVPGSRGDR FWIGTSDTAE ETARTHDAAM LALCGASASL NFADSAWLLH  120
VPRAPVVSGL RPLAARCATR CLQGHRRVPA PGRGSTATAT ATSGDAASTA PPSAPVLSAK  180
QCEFIFLSSL DFHMLFSHSS AALYKPREAS LPRRRSQSGD PRRARDRSKL LHRSHDMAEA  240
ASAAAAATTE QANGSSGGEQ KTRHSEVGHK SLLKSDDLYQ YILETSVYPR EHECMKELRE  300
VTANHPWNLM TTSADEGQFL NLLLKLIGAK KTMEIGVYTG YSLLATALAI PDDGTILAMD  360
INRENYELGL PSIEKAGVAH KIDFREGPAL PVLDQLVEEE GNHGSFDFVF VDADKDNYLN  420
YHERLMKLVK VGGLVGYDNT LWNGSVVLPA DAPMRKYIRY YRDFVLELNK ALAADHRVEI  480
CQLPVGDGIT LCRRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25480.1	2e-27	ERF family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G05580.1