PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G02390.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 334aa MW: 35602.4 Da PI: 10.6378

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G02390.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.7	3.1e-14	102	146	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ I++ + ++Rt+ q+ s+ qky ONIVA06G02390.1 102 PWTEEEHRTFLAGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKY 146 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MPQDSRPAAM RLFGVTISPP PPPAEPDPSD RRDPSPRPAR EDAMRKCKSM GNLAAAAASS 60 AAAGGGGAGD AGGSGDGYLS DGGLLQSSGK RRRAQERKKA VPWTEEEHRT FLAGLEKLGK 120 GDWRGISKNF VTTRTPTQVA SHAQKYFLRQ TNPNKKKRRS SLFDMMATDM SPAPNCPVLP 180 PSMGKLHDMV TMTKQLQNSS LEGVSSSSTV NLAPQVARDL PPPIPSFKAT NVDSSLSKMN 240 HMDGFFRAPM LFRPIPRIAE GASSSTPATA SIADLEFQAN LTACSNALFA SPRRKPKKAD 300 PPAEKDLDLT VTPPSQQTRA SISSQNAVGV IQVV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	159	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47390.1	3e-37	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G02390.1