PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G24200.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HSF

Protein Properties

Length: 459aa MW: 51163.9 Da PI: 4.9482

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G24200.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109	3.4e-34	21	112	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 Fl k+ye++ed+++++++sw g sfvv+++ +f++++LpkyFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +g+++ll+ ONIVA05G24200.1 21 FLIKTYEMVEDAATNHVVSWGPGGASFVVWNPLDFSRDLLPKYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEDFIRGHTHLLK 105 9**************************************************************999.........************* PP XXXXXXX CS HSF_DNA-bind 96 kikrkks 102 +i+r+k ONIVA05G24200.1 106 NIHRRKP 112 **985 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MESSNLGGGG GGGGGGGPPP FLIKTYEMVE DAATNHVVSW GPGGASFVVW NPLDFSRDLL 60 PKYFKHNNFS SFIRQLNTYG FRKIDPERWE FANEDFIRGH THLLKNIHRR KPVHSHSLQN 120 QINGPLAESE RRELEEEINR LKYEKSILVA DLQRQNQQQY VINWQMQAME GRLVAMEQRQ 180 KNIVASLCEM LQRRGGAVSS SLLESDHFSK KRRVPKMDLF VDDCAAGEEQ KVFQFQGIGT 240 DAPAMPPVLP VTNGEAFDRV ELSLVSLEKL FQRANDACTA AEEMYSHGHG GTEPSTAICP 300 EEMNTAPMET GIDLQLPASL HPSSPNTGNA HLHLSTELTE SPGFVQSPEL PMAEIREDIH 360 VTRYPTQADV NSEIASSTDT SQDGTSETEA SHGPTNDVFW ERFLTETPRS CLDESERQES 420 PKDDVKAELG CNGFHHREKV DQITEQMGHL ASAEQTLHT

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MESSNLGGGG GGGGGGGPPP FLIKTYEMVE DAATNHVVSW GPGGASFVVW NPLDFSRDLL  60
PKYFKHNNFS SFIRQLNTYG FRKIDPERWE FANEDFIRGH THLLKNIHRR KPVHSHSLQN  120
QINGPLAESE RRELEEEINR LKYEKSILVA DLQRQNQQQY VINWQMQAME GRLVAMEQRQ  180
KNIVASLCEM LQRRGGAVSS SLLESDHFSK KRRVPKMDLF VDDCAAGEEQ KVFQFQGIGT  240
DAPAMPPVLP VTNGEAFDRV ELSLVSLEKL FQRANDACTA AEEMYSHGHG GTEPSTAICP  300
EEMNTAPMET GIDLQLPASL HPSSPNTGNA HLHLSTELTE SPGFVQSPEL PMAEIREDIH  360
VTRYPTQADV NSEIASSTDT SQDGTSETEA SHGPTNDVFW ERFLTETPRS CLDESERQES  420
PKDDVKAELG CNGFHHREKV DQITEQMGHL ASAEQTLHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	2e-66	HSF family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G24200.1