PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G23670.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 492aa    MW: 53733.5 Da    PI: 6.5101
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G23670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM836.2e-26201573128
              NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratk..sgyWk.atg 87 
                      +GfrF+P++ e v +yL ++++g++   + +i   ++y++ P++L  +        ++e+ wyf s+rd+ky++gkr++r+t+  +g+Wk +tg
  ONIVA05G23670.1  20 MGFRFKPREAEAVEYYLLPRLQGRPPVPNPAIVVENVYEFAPERLInEkcnggVGGEGEEGWYFLSPRDRKYRNGKRPSRSTEdkAGRWKaSTG 113
                      7************************7666779999**********733455532233777********************887679****5466 PP

              NAM  88 k...dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k   + ++++  g ++ + ++Lv++kg  ++ +kt+W+m e+++
  ONIVA05G23670.1 114 KtegKDPITECYGWVKFCVTSLVYFKGPVKTEKKTKWLMREFTI 157
                      64435678777888999**********99999**********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    
MAGLGKGESS GGGGGGGGEM GFRFKPREAE AVEYYLLPRL QGRPPVPNPA IVVENVYEFA  60
PERLINEKCN GGVGGEGEEG WYFLSPRDRK YRNGKRPSRS TEDKAGRWKA STGKTEGKDP  120
ITECYGWVKF CVTSLVYFKG PVKTEKKTKW LMREFTIPHF ENKLDKTAAA GGSSNQRQLD  180
QYVLCRIYTS PKKGADDGEQ AEVVRGGGGE DIDEWAEACA VFDLGPETAE GSDNADAAAA  240
EGDMRSAKQA GKRPVAAAAV AEQPSKRPWL PPSPSTPCDG GPSQAMGNRQ VPMQGLSLMH  300
NFPPPPTTFC GHAPLQQGFP VHNNRAQMRW PTMQHNCMPS PAHSFQPRPV QRRPVLVGQA  360
PPQRGPVHHV GGHAPMHMHQ AQWTPVHIAQ APMQQLPFDD WVFDPFDDPP PPMQQLPVMM  420
NNYQPQAPMQ LPPMMNNDQP AMVHGGELQA PMQLLPATTH GGEVQAPMPL NVYEEEQRPS  480
QEDGGQCTNA EG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.19e-19NAC family protein