PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G22270.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 24143.3 Da PI: 9.3484 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.3 | 2.6e-20 | 37 | 87 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +gr++AeIrdp k+ r++lg+f+taeeAa+a++aa+++++g+ ONIVA05G22270.1 37 HFRGVRKRP-WGRYAAEIRDPA---KKSRVWLGTFDTAEEAARAYDAAAREYRGA 87 69*******.**********83...36**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MAPRTSDKTM SPAAAATGLA LGVGGVAGAT AVGTGQHFRG VRKRPWGRYA AEIRDPAKKS 60 RVWLGTFDTA EEAARAYDAA AREYRGAKAK TNFPYPNGAP AAGVNSGSSN SSTVESFGSD 120 VQAPMKAMPI PPSLELDLFH RAAAAAAAGA GGMRFPFEGY PVSHPYYFFG QAAAAAAASG 180 CRMLKIAPAP VTVAALAQSD SDSSSIVDLA PSPPAALAKK AIAFDLDLNC PPPMEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-20 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G22270.1 |