PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G21870.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 388aa MW: 42787.4 Da PI: 10.0131

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G21870.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.9	2e-32	176	230	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l +m+v+g+t++hvkSHLQkYRl ONIVA05G21870.3 176 KQRLRWTSDLHNRFVDAIAQLGGPDRATPKGVLTVMGVPGITIYHVKSHLQKYRL 230 79****************************************************8 PP
2	Myb_DNA-binding	51.4	2.5e-16	178	229	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT +++ ++vda++qlGg+ t+k + mg g t +++ks++qky+ ONIVA05G21870.3 178 RLRWTSDLHNRFVDAIAQLGGPdraTPKGVLTVMGvPGITIYHVKSHLQKYR 229 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MGPTPWTRPT VHSSFPLPSR RRENPNQHNE TTRKRECEAK RAKKEREKKK SPQIPRPPSP 60 LSLALPSPRV AFAGHHRPSP LSPPLLSSRR LLPSLFDPPN SQLGIPPRTA AEAEAAEESI 120 WFPCAARFLV VVAAAGGGSL PRRAGKSTQS NEHMSNIGAF GGSNMGSPAN PAGSGKQRLR 180 WTSDLHNRFV DAIAQLGGPD RATPKGVLTV MGVPGITIYH VKSHLQKYRL AKYIPESPAE 240 GSKDEKKDSS DSLSNTDSAP GMQINEALKM QMEVQKRLHE QLEVQRQLQL RIEAQGKYLQ 300 MIIEEQQKLG GSLKACEEQK LPHSPPSLDD YPDSMQPSPK KPKMDNLSPD SVRDVTQSDF 360 ESHLIGPWDQ EAAFRVDEFK ADPGLNKS

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MGPTPWTRPT VHSSFPLPSR RRENPNQHNE TTRKRECEAK RAKKEREKKK SPQIPRPPSP  60
LSLALPSPRV AFAGHHRPSP LSPPLLSSRR LLPSLFDPPN SQLGIPPRTA AEAEAAEESI  120
WFPCAARFLV VVAAAGGGSL PRRAGKSTQS NEHMSNIGAF GGSNMGSPAN PAGSGKQRLR  180
WTSDLHNRFV DAIAQLGGPD RATPKGVLTV MGVPGITIYH VKSHLQKYRL AKYIPESPAE  240
GSKDEKKDSS DSLSNTDSAP GMQINEALKM QMEVQKRLHE QLEVQRQLQL RIEAQGKYLQ  300
MIIEEQQKLG GSLKACEEQK LPHSPPSLDD YPDSMQPSPK KPKMDNLSPD SVRDVTQSDF  360
ESHLIGPWDQ EAAFRVDEFK ADPGLNKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	3e-54	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G21870.3