PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G21870.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family G2-like
Protein Properties Length: 430aa    MW: 47559 Da    PI: 9.8117
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G21870.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.91.1e-28212272155
          G2-like   1 kprlrWtpeLHerFveaveqLGGse......kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      k+rlrWt++LH+rFv+a++qLGG++      +AtPk +l +m+v+g+t++hvkSHLQkYRl
  ONIVA05G21870.2 212 KQRLRWTSDLHNRFVDAIAQLGGPDsgyslsRATPKGVLTVMGVPGITIYHVKSHLQKYRL 272
                      79*********************975555558****************************8 PP
2Myb_DNA-binding50.25.8e-16214271148
                      TSSS-HHHHHHHHHHHHHTTTT.........-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.........tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT +++ ++vda++qlGg+         t+k +   mg  g t +++ks++qky+
  ONIVA05G21870.2 214 RLRWTSDLHNRFVDAIAQLGGPdsgyslsraTPKGVLTVMGvPGITIYHVKSHLQKYR 271
                      89*******************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MGPTPWTRPT VHSSFPLPSR RRENPNQHNE TTRKRECEAK RAKKEREKKK SPQIPRPPSP  60
LSLALPSPRV AFAGHHRPSP LSPPLLSSRR LLPSLFDPPN SQLGIPPRTA AEAEAAEESI  120
WFPCAARFLV VVAAAGGGSL PRRAGKQGIE APVEKLYYST IQLCYILMMY HAKKFSVPFG  180
PQSTQSNEHM SNIGAFGGSN MGSPANPAGS GKQRLRWTSD LHNRFVDAIA QLGGPDSGYS  240
LSRATPKGVL TVMGVPGITI YHVKSHLQKY RLAKYIPESP AEGSKDEKKD SSDSLSNTDS  300
APGMQINEAL KMQMEVQKRL HEQLEVQRQL QLRIEAQGKY LQMIIEEQQK LGGSLKACEE  360
QKLPHSPPSL DDYPDSMQPS PKKPKMDNLS PDSVRDVTQS DFESHLIGPW DQEAAFRVDE  420
FKADPGLNKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-51G2-like family protein