PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G21870.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 424aa MW: 46964.4 Da PI: 9.8417

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G21870.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.7	2.3e-32	212	266	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l +m+v+g+t++hvkSHLQkYRl ONIVA05G21870.1 212 KQRLRWTSDLHNRFVDAIAQLGGPDRATPKGVLTVMGVPGITIYHVKSHLQKYRL 266 79****************************************************8 PP
2	Myb_DNA-binding	51.2	2.8e-16	214	265	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT +++ ++vda++qlGg+ t+k + mg g t +++ks++qky+ ONIVA05G21870.1 214 RLRWTSDLHNRFVDAIAQLGGPdraTPKGVLTVMGvPGITIYHVKSHLQKYR 265 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MGPTPWTRPT VHSSFPLPSR RRENPNQHNE TTRKRECEAK RAKKEREKKK SPQIPRPPSP 60 LSLALPSPRV AFAGHHRPSP LSPPLLSSRR LLPSLFDPPN SQLGIPPRTA AEAEAAEESI 120 WFPCAARFLV VVAAAGGGSL PRRAGKQGIE APVEKLYYST IQLCYILMMY HAKKFSVPFG 180 PQSTQSNEHM SNIGAFGGSN MGSPANPAGS GKQRLRWTSD LHNRFVDAIA QLGGPDRATP 240 KGVLTVMGVP GITIYHVKSH LQKYRLAKYI PESPAEGSKD EKKDSSDSLS NTDSAPGMQI 300 NEALKMQMEV QKRLHEQLEV QRQLQLRIEA QGKYLQMIIE EQQKLGGSLK ACEEQKLPHS 360 PPSLDDYPDS MQPSPKKPKM DNLSPDSVRD VTQSDFESHL IGPWDQEAAF RVDEFKADPG 420 LNKS

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MGPTPWTRPT VHSSFPLPSR RRENPNQHNE TTRKRECEAK RAKKEREKKK SPQIPRPPSP  60
LSLALPSPRV AFAGHHRPSP LSPPLLSSRR LLPSLFDPPN SQLGIPPRTA AEAEAAEESI  120
WFPCAARFLV VVAAAGGGSL PRRAGKQGIE APVEKLYYST IQLCYILMMY HAKKFSVPFG  180
PQSTQSNEHM SNIGAFGGSN MGSPANPAGS GKQRLRWTSD LHNRFVDAIA QLGGPDRATP  240
KGVLTVMGVP GITIYHVKSH LQKYRLAKYI PESPAEGSKD EKKDSSDSLS NTDSAPGMQI  300
NEALKMQMEV QKRLHEQLEV QRQLQLRIEA QGKYLQMIIE EQQKLGGSLK ACEEQKLPHS  360
PPSLDDYPDS MQPSPKKPKM DNLSPDSVRD VTQSDFESHL IGPWDQEAAF RVDEFKADPG  420
LNKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-53	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G21870.1