PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G18720.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 365aa    MW: 37131.2 Da    PI: 4.9708
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G18720.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.3e-20164213255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a+++++g
  ONIVA05G18720.1 164 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 213
                      7********.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MADQRRRFRG GGDWQASVDD VVDDGGELEA AAAAAAARGS VLSGEYQAQE MSTMVSALTW  60
VVAAGHDDHG GGQWSGLVDV PATTLAGGGG GDYGHGAQGS YYYYGAAPTS TPEFVAGGQQ  120
EQLSSDVPQG GASLGLAMDE HSPTYTVEAS SSADQHGGGG GGRRYRGVRQ RPWGKWAAEI  180
RDPHKAARVW LGTFETAEAA ARAYDEAALR FRGSRAKLNF PEDARLSSPP AGAGAGGATA  240
AAQPVPVAYP ASAVSDYLQY QMLLHGGGGG GGGRYPLYYG GGAAAAMSSS LGPYSSIPTS  300
SVTVASVPSS SSAASSSSGY GAPAEHGEAV QWTSWPDGGG WTYPATTSSW SGSSQYPPPP  360
RPPQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.11e-16ERF family protein