PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G17050.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family G2-like
Protein Properties Length: 281aa    MW: 29060.7 Da    PI: 7.4145
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G17050.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.91.5e-3060113155
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  ONIVA05G17050.1  60 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 113
                      59*******************.********************************8 PP
2Myb_DNA-binding48.32.3e-1562112148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
  ONIVA05G17050.1  62 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 112
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MREEEEPSWF ARWEEQLPAP DELMPLSQSL ITPDLAVAFD IPTHGGGGGG GDEPARTLKR  60
PRLVWTPQLH KRFVDAVAHL GIKNAVPKTI MQLMSVDGLT RENVASHLQK YRLYLKRMQG  120
VGNGGGGGGG GGAGAGGSHS SGSGTDAATE HLFATGPVPF LPPGRAPAGG DPYPPFAPMG  180
GHHHHPPQIG HFHHHPAARP LGHYGSGPGA GFDHGFLSRA VAGGGPPVGP PGMHHRMVGP  240
AAGMAMMAPS PFAEELELGS RGGGGGGGRR ELTLFPTTGD H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1261269RGGGGGGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05090.12e-53G2-like family protein