PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G12270.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 559aa    MW: 59833.2 Da    PI: 3.8286
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G12270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM81.61.7e-2571381128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWk..atgkdke 91 
                      l pG++F+P+d++lv +yL ++++g++l+l+ vi e+d +++ Pw+L +  +++ +e +fF++++ k+ +gkr++r +   g+W+  +t  d e
  ONIVA05G12270.1   7 LLPGLKFDPSDHDLVGRYLLRRLQGQPLPLDGVILEADPLSAPPWKLLAD-HGRGDEAFFFAEAHAKNGKGKRQKRtVEGGGFWQgqKTCVDGE 99 
                      579***************************999**************743.456789*******************555599**9334444555 PP

              NAM  92 vlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       l+     + e  + k +L f+  + ++g ++ Wvmhey++
  ONIVA05G12270.1 100 RLCVpddgGLEIAWRKYVLSFFA-NGERG-SSGWVMHEYAV 138
                      444456655555888999****4.44444.89*******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    
MAAADGLLPG LKFDPSDHDL VGRYLLRRLQ GQPLPLDGVI LEADPLSAPP WKLLADHGRG  60
DEAFFFAEAH AKNGKGKRQK RTVEGGGFWQ GQKTCVDGER LCVPDDGGLE IAWRKYVLSF  120
FANGERGSSG WVMHEYAVTA PDGLASSQLR LYRVRFSGYG KKRKREPQCP GAHGDDDGEL  180
QRAPPPRSMA GTALLEERGP LPHPVLGPAS VVDQCTDQCS SGVIDDSSVV FRDLPDLIDL  240
PVAEEADASH GAETALLNEH LPLPPPQLFV PPTAVPLDLA DDSNGADQNS YGMMGDDQLL  300
LPDLPGTIND DMPDLFVSQA EEASAVPAIS YHSSGFMGNE VAALSDFELP ESYSSSDAMD  360
GEALALSNYE FPESFEEDLS CFDFATANAS SLGFPMDGYP MDELFDDMPD QGSSGAMDDS  420
SVVFRDLPGL INLPAAEEAD AIGDAETALL RDLADDSNGT DRNSYGVMGD DQDRLLLPEI  480
PRRIDMPDLF VSQAEEAGLG GGAALDSSSG AMDGEALALS DFEFPESVEE VLSCMDFSTV  540
DMSCLDVPID ELLDDLPAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02250.16e-09NAC family protein