PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G12080.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 428aa MW: 44034.7 Da PI: 7.1684

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G12080.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	83.9	1.5e-26	228	287	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++ gs++prsYYrCt++ gC++kkkv+r ++dp + e+tY g+H++ ONIVA05G12080.1 228 DDGYTWRKYGQKDILGSRYPRSYYRCTHKnyyGCEAKKKVQRLDDDPFTYEVTYCGNHTC 287 8*************************99999***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MHVFAPHQVT PLSVLLAAAA GGGFDRRDRS RVVGGGGGGQ EGWEMDEVLA QISEGFRLAG 60 ELMSELAATQ NDPDYLAARC HAIAGAYAAA ARVLQGARHG GGGVGAASTS FGGEGYLHHQ 120 HRQQLDLLRM CVGGTAPDEA AAAANPFLGG GGGATTAAFR APSDAYGGAG AGTSGGPVRR 180 VSSSSRSPPS PVQPRQGGAG SRRRRESGEK VTVMVAAQRT GNTEQPPDDG YTWRKYGQKD 240 ILGSRYPRSY YRCTHKNYYG CEAKKKVQRL DDDPFTYEVT YCGNHTCLTS TTPLLTLPAA 300 AATSVTNSPT AAAVLGQDFV MAPAADQQPP QHQQAQPPLS TSIHLGIGWP MTPASLAGAV 360 GEGSTSTTAT APQVTTMGAT AAGGGGAAAR DADHYPVADL ADVMFNSGGS GSSSIMDGIF 420 SSHDRRDN

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MHVFAPHQVT PLSVLLAAAA GGGFDRRDRS RVVGGGGGGQ EGWEMDEVLA QISEGFRLAG  60
ELMSELAATQ NDPDYLAARC HAIAGAYAAA ARVLQGARHG GGGVGAASTS FGGEGYLHHQ  120
HRQQLDLLRM CVGGTAPDEA AAAANPFLGG GGGATTAAFR APSDAYGGAG AGTSGGPVRR  180
VSSSSRSPPS PVQPRQGGAG SRRRRESGEK VTVMVAAQRT GNTEQPPDDG YTWRKYGQKD  240
ILGSRYPRSY YRCTHKNYYG CEAKKKVQRL DDDPFTYEVT YCGNHTCLTS TTPLLTLPAA  300
AATSVTNSPT AAAVLGQDFV MAPAADQQPP QHQQAQPPLS TSIHLGIGWP MTPASLAGAV  360
GEGSTSTTAT APQVTTMGAT AAGGGGAAAR DADHYPVADL ADVMFNSGGS GSSSIMDGIF  420
SSHDRRDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	2e-37	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G12080.1