PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G11840.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 278aa    MW: 29946.5 Da    PI: 10.2
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G11840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.4e-1894143255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                      +++GVr+++ +gr+ AeIrdp     +  kr +lg+f+taeeAa+ ++ a+++++g
  ONIVA05G11840.1  94 RFRGVRRRP-WGRFSAEIRDP-----SlqKRLWLGTFDTAEEAAAVYDDAALRIKG 143
                      69*******.**********9.....445************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MSPADSLAAG RSRRVGASMP RPKRVRVYFV DADATDTDSS GDERSRPRVR EVIDIDVGAA  60
SPAPAPAPKH PRRLVPTATA ALARRRAGMA ASRRFRGVRR RPWGRFSAEI RDPSLQKRLW  120
LGTFDTAEEA AAVYDDAALR IKGSHAVTNF PSDSDTPSAK AKQMKLHPRR HTTPDKTPSS  180
STAAAAKASV PDPTPAPPEE DRANDSSFNP FASPTSVLRY AAADEVTAPS FEHLLVELGD  240
LSAPPPSTKA AEFDWLPWWE GEDFVTAGLT ASNAVSVK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
185102RRAGMAASRRFRGVRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.15e-08ERF family protein