PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G08650.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 308aa    MW: 34545.6 Da    PI: 7.0287
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G08650.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY621.1e-19147208359
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS..STTEEEEEEES--SS- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae..dpkvveitYegeHnhe 59 
                      Dg++WrKYGqK++++s++ rsYYrC+++   +C+++k v++ ++  ++ + +++Y g+H+++
  ONIVA05G08650.1 147 DGHQWRKYGQKNINNSNHQRSYYRCSYKheqNCKATKTVQQLDSagETIMYTVVYYGQHTCK 208
                      9*************************99999*********9766115567899*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MKNKGSSCRY LPHSSAPCAT DGARCFRCDH RPAIDEIVRE QSLVTQLRAV VLPALETKAD  60
DGRAEIVAQL FGSILDCSRK VISALNSRYV GESPPDDDEI VDKRRAKRKN SEGKKGDDQV  120
KVKPHEHKRS RRYTNSTSQI TAVPHYDGHQ WRKYGQKNIN NSNHQRSYYR CSYKHEQNCK  180
ATKTVQQLDS AGETIMYTVV YYGQHTCKTN MSNAPLHVVE TSTPQSISTT CCSDDLGDYS  240
QKMENMHTPE LAEVCSDELG SYHAIIGAEH SALGLEDEHM HKLLDTFACG ALDLDSWEID  300
AIVRSGFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-21WRKY family protein