PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G01580.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | C2H2 | ||||||||
Protein Properties | Length: 380aa MW: 43065.1 Da PI: 8.6163 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 20.4 | 1.4e-06 | 80 | 102 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cg sF+ + +L++H+++H ONIVA05G01580.3 80 HDCKVCGASFKKPAHLRQHMQSH 102 56*******************99 PP | |||||||
2 | zf-C2H2 | 19.7 | 2.3e-06 | 108 | 132 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ C+ s+srk++L+rH+ tH ONIVA05G01580.3 108 FSCHvdGCPFSYSRKDHLNRHLLTH 132 89*********************99 PP | |||||||
3 | zf-C2H2 | 11.3 | 0.0011 | 137 | 162 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 + Cp C++ F+ k n +rH + H ONIVA05G01580.3 137 FACPmeGCNRKFTIKGNIQRHVQEmH 162 78*******************98877 PP | |||||||
4 | zf-C2H2 | 20.8 | 1e-06 | 174 | 198 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp +Cgk+F+ s L++H +H ONIVA05G01580.3 174 FICPeeNCGKTFKYASKLQKHEESH 198 78*******************9988 PP | |||||||
5 | zf-C2H2 | 16.9 | 1.8e-05 | 265 | 289 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 +C+ dC+ sFs ksnL +H + H ONIVA05G01580.3 265 RCHlkDCKLSFSKKSNLDKHVKAvH 289 7*******************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MGSVELGAEE REVAGGEGGS KGAAPPARDI RRYKCDFCSV VRSKKGLIRA HVLEHHKDEV 60 DDLDDYLGRG GGETCKEMDH DCKVCGASFK KPAHLRQHMQ SHSLERPFSC HVDGCPFSYS 120 RKDHLNRHLL THQGKLFACP MEGCNRKFTI KGNIQRHVQE MHKDGSPCES KKEFICPEEN 180 CGKTFKYASK LQKHEESHVK LDYSEVICCE PGCMKAFTNL ECLKAHNKSC HRHVVCDVCG 240 TKQLKKNFKR HQRMHEGSCV TERVRCHLKD CKLSFSKKSN LDKHVKAVHE QKRPFVCGFS 300 GCGKSFSYKH VRDNHEKSSA HVYVQANFEE IDGERPRQAG GRKRKAIPVE SLMRKRVAAP 360 DDDAPACDDG TEYLRWLLSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-115 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G01580.3 |