PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G01580.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 407aa MW: 46026.4 Da PI: 8.4664

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G01580.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.3	1.5e-06	80	102	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cg sF+ + +L++H+++H ONIVA05G01580.2 80 HDCKVCGASFKKPAHLRQHMQSH 102 56*******************99 PP
2	zf-C2H2	19.6	2.5e-06	135	159	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ C+ s+srk++L+rH+ tH ONIVA05G01580.2 135 FSCHvdGCPFSYSRKDHLNRHLLTH 159 89*********************99 PP
3	zf-C2H2	11.1	0.0012	164	189	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 + Cp C++ F+ k n +rH + H ONIVA05G01580.2 164 FACPmeGCNRKFTIKGNIQRHVQEmH 189 78*******************98877 PP
4	zf-C2H2	20.7	1.1e-06	201	225	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp +Cgk+F+ s L++H +H ONIVA05G01580.2 201 FICPeeNCGKTFKYASKLQKHEESH 225 78*******************9988 PP
5	zf-C2H2	16.8	1.9e-05	292	316	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 +C+ dC+ sFs ksnL +H + H ONIVA05G01580.2 292 RCHlkDCKLSFSKKSNLDKHVKAvH 316 7*******************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MGSVELGAEE REVAGGEGGS KGAAPPARDI RRYKCDFCSV VRSKKGLIRA HVLEHHKDEV 60 DDLDDYLGRG GGETCKEMDH DCKVCGASFK KPAHLRQHMQ SHSLEALNGL VSGWGDSPEK 120 LHQECLVHTL FQRPFSCHVD GCPFSYSRKD HLNRHLLTHQ GKLFACPMEG CNRKFTIKGN 180 IQRHVQEMHK DGSPCESKKE FICPEENCGK TFKYASKLQK HEESHVKLDY SEVICCEPGC 240 MKAFTNLECL KAHNKSCHRH VVCDVCGTKQ LKKNFKRHQR MHEGSCVTER VRCHLKDCKL 300 SFSKKSNLDK HVKAVHEQKR PFVCGFSGCG KSFSYKHVRD NHEKSSAHVY VQANFEEIDG 360 ERPRQAGGRK RKAIPVESLM RKRVAAPDDD APACDDGTEY LRWLLSG

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MGSVELGAEE REVAGGEGGS KGAAPPARDI RRYKCDFCSV VRSKKGLIRA HVLEHHKDEV  60
DDLDDYLGRG GGETCKEMDH DCKVCGASFK KPAHLRQHMQ SHSLEALNGL VSGWGDSPEK  120
LHQECLVHTL FQRPFSCHVD GCPFSYSRKD HLNRHLLTHQ GKLFACPMEG CNRKFTIKGN  180
IQRHVQEMHK DGSPCESKKE FICPEENCGK TFKYASKLQK HEESHVKLDY SEVICCEPGC  240
MKAFTNLECL KAHNKSCHRH VVCDVCGTKQ LKKNFKRHQR MHEGSCVTER VRCHLKDCKL  300
SFSKKSNLDK HVKAVHEQKR PFVCGFSGCG KSFSYKHVRD NHEKSSAHVY VQANFEEIDG  360
ERPRQAGGRK RKAIPVESLM RKRVAAPDDD APACDDGTEY LRWLLSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-109	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G01580.2