PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G01570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 195aa MW: 22087.8 Da PI: 9.1071 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.3 | 6.2e-12 | 33 | 81 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT+eEd l ++ + +G ++ +++a++m+ +R++kqc++rw+++l ONIVA05G01570.1 33 AWTPEEDACLERLARGYGFRHGRRVAEEMQpreRRRSPKQCRDRWRDHL 81 8*********************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
METSSSDFSS TTEVAATPSS AMRIILRIRL SPAWTPEEDA CLERLARGYG FRHGRRVAEE 60 MQPRERRRSP KQCRDRWRDH LARDVYHRPF TADDDAELAH LRLRGGGGDR WKDISRAAHC 120 RTSRAMRRRW RELRKSDAFL RALYWHPDQP VPPLLDDAWS CSDVLDSSVA SYRGGCDAVA 180 GGGTIVAPGF ACFAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 1e-14 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G01570.1 |