PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G29890.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 285aa    MW: 31939.8 Da    PI: 6.5015
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G29890.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.15.3e-4781422128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek..ewyfFskrdkkya....tgkrknratksgyWkatgkd 89 
                      +pGfrFhPt+eelv +yL++kv g++ +   +i+evd++++ePwdL  +++++++   +yfFs +d+ky+    tg+r+nrat++g+Wkatg+d
  ONIVA04G29890.1   8 APGFRFHPTEEELVGYYLARKVVGQQDDG--IIQEVDLNSIEPWDLL-QAQQHDQeyYCYFFSYKDRKYPsargTGTRTNRATAAGFWKATGRD 98 
                      79************************666..8**************7.34444441366**********98888899***************** PP

              NAM  90 kevlsk..kgel.....vglkktLvfykgrapkgektdWvmheyrl 128
                      k+vls+  +        +g++ktLvfy+grap+g ktdW++heyrl
  ONIVA04G29890.1  99 KPVLSSsrS--SsspavIGMRKTLVFYRGRAPNGCKTDWIIHEYRL 142
                      *****8551..245556***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MEEWCCVAPG FRFHPTEEEL VGYYLARKVV GQQDDGIIQE VDLNSIEPWD LLQAQQHDQE  60
YYCYFFSYKD RKYPSARGTG TRTNRATAAG FWKATGRDKP VLSSSRSSSS PAVIGMRKTL  120
VFYRGRAPNG CKTDWIIHEY RLVAHHQQPD GSCWVVCRAF HKPTTTTLQH QLHLHRPPPL  180
LHHPGYYDDQ YLYPPPAAAG GGGLLCSPAL DMELEDEEDE SKMMILSNDN IPLVVSPTAV  240
HTQGTGGDII NDATTAPAAA DHRRHPELLA AGPIDTLLHH HHFTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66300.11e-48NAC family protein