PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G24570.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 332aa    MW: 36088.4 Da    PI: 8.4444
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G24570.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.65.2e-49111751128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikevdiykvePwdLpk.....................kvkaeekewyfFskr 64 
                      lppGfrFhP+deelvv+yL +k++g        +       ++ +vd++k+ePw+Lp+                     +++ + +ewyfFs +
  ONIVA04G24570.2  11 LPPGFRFHPRDEELVVDYLYHKLSGGGgagageF---YggvAMVDVDLNKCEPWELPAyflhnliifparaagrrrradAARVGATEWYFFSLH 101
                      79**********************9997665442...144369**************6699********99999887764455888******** PP

              NAM  65 dkkyatgkrknratksgyWkatgkdkevlsk..........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      d+kyatg+r+nrat+sgyWkatgkd++++++          +ge+vg++ktLvfy+grap+g+kt+Wvmhe+r+
  ONIVA04G24570.2 102 DRKYATGQRTNRATRSGYWKATGKDRAIVTRrraaggeavaGGEVVGMRKTLVFYQGRAPRGSKTEWVMHEFRV 175
                      ******************************977877777776677***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MSLISMMEAN LPPGFRFHPR DEELVVDYLY HKLSGGGGAG AGEFYGGVAM VDVDLNKCEP  60
WELPAYFLHN LIIFPARAAG RRRRADAARV GATEWYFFSL HDRKYATGQR TNRATRSGYW  120
KATGKDRAIV TRRRAAGGEA VAGGEVVGMR KTLVFYQGRA PRGSKTEWVM HEFRVDGHAV  180
ADHPSSSTSS SSSNLLKEDW VLCRVFYKSR TANPRPVVSG EAAVSLSGEL SLPPPPPLPV  240
APAVVDGYTG GGYYEQDSSA GCHHHHHRPP TSAALPFKDL TDFRDLLSNM VQGGGGAAAA  300
AKSEGFHLGW SEEESSGYVQ QSAMASQAWN PF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12977.15e-59NAC family protein