PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G23170.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 279aa MW: 30800 Da PI: 8.7589

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G23170.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	9.4e-34	21	75	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LHerFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl ONIVA04G23170.1 21 KPRLRWTPDLHERFVDAVTRLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRL 75 79****************************************************8 PP
2	Myb_DNA-binding	69.4	5.9e-22	23	74	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ ONIVA04G23170.1 23 RLRWTPDLHERFVDAVTRLGGPdkaTPKSVLRLMGmKGLTLYHLKSHLQKYR 74 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MFEGCYGGVG SAAAAATRDP KPRLRWTPDL HERFVDAVTR LGGPDKATPK SVLRLMGMKG 60 LTLYHLKSHL QKYRLGRQSK KSAGLELAVA DSGEFTAEGI SFSIGAPPRN PAGGNNTGEI 120 PLADALKYQV EVQRKLQEQL EVQKKLQMRI EAQGRYLKEI LEKAQKNISL DANGSANLSS 180 TRSQITDINL ALSGFMDNAT QVQEENNELM KPISDDNLKV NNLGFQLYHL GSQESKDVKC 240 TPKTEELLLL DLNIQGGYEL SSRGMQGCEL DLKINQQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	3e-53	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G23170.1