PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G20840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 23899.7 Da PI: 5.36 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.7 | 2.5e-17 | 51 | 101 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + ykGVr + grWv+e+r+p g ++r++lg+f tae+Aa+a++ a+ +l+g ONIVA04G20840.1 51 PVYKGVRSRN-PGRWVCEVREP--HG-KQRIWLGTFETAEMAARAHDVAAMALRG 101 68****9666.9******9996..33.5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MEWAYYGSGY SSSGTPSPVG GDGDEDSYMT VSSAPPKRRA GRTKFKETRH PVYKGVRSRN 60 PGRWVCEVRE PHGKQRIWLG TFETAEMAAR AHDVAAMALR GRAACLNFAD SPRRLRVPPL 120 GAGHEEIRRA AVEAAELFRP APGQHNAAAE AAAAVAAQAT AASAELFADF PCYPMDGLEF 180 EMQGYLDMAQ GMLIEPPPLA GQSTWAEEDY DCEVNLWSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 5e-37 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G20840.1 |