PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G18900.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 319aa    MW: 33153.8 Da    PI: 4.7654
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G18900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-20153203255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f+tae+Aa a+++a+ +++g
  ONIVA04G18900.1 153 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFDTAEDAALAYDRAAYRMRG 203
                      8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MARSMLRNHP EASVLDTIRQ HLLEEPRGGG GGGGEAAEAS FGSLVADMWS DSLPFRDDDA  60
DDMVVFGAMR DAFSCGWLPD GVFAEVKPEP LLSPDSSSYD GSSCCFGFAD VSEPVTPSDA  120
ASGAAEAAAA AAAATAEHGK EEEAAAAVAR GKHYRGVRQR PWGKFAAEIR DPAKNGARVW  180
LGTFDTAEDA ALAYDRAAYR MRGSRALLNF PLRIGSEIAA AAAAAAAAAA GDKRPSPEPA  240
TSESSFSSSS SCTTTTTSSS TSSSGSPKRR KRGEAAAASM SMPLVPPPSQ LNWPVQAWYP  300
AAAPVEQVAI TPRVEQLVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.15e-28ERF family protein