PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G17660.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

ERF

Protein Properties

Length: 466aa MW: 49732.2 Da PI: 8.9543

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G17660.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	60.2	4.8e-19	214	264	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge ONIVA04G17660.1 214 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 264 59****9.******955...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MDAPSGESGG GGGGGGGRRW KGKGVTPIQP RRQLGTVLED SSAALLRPLK KIGRSPDRLL 60 RSASSLSTSS SAPPSPRSSS ASDAPVRVIS SSPSSPSPPS ARHIFPFAYE ASTTTVGGSP 120 RLHPLSWQQS SMSQPASPQQ QQQQPLQHQQ MISFGASPPC STTQFVVPEN AQQQQMLLRY 180 WSEALNLSPR GGPGGVPPWL YQQLLRVPPP PQKLYRGVRQ RHWGKWVAEI RLPRNRTRLW 240 LGTFDTAEDA AMAYDREAFK LRGENARLNF PDRFLGKGRA GGSGRTSVSS SAAAAASCSS 300 SSPSPPETPD DANTQQQAPQ QREQRDTAGV SMGKKQPQPP APTSRQEGCS GGDAAAPYPA 360 EMLHAPAACG GMWVAPDESW FSTWGPGSSF WDDYDMDSAR GLFLHPRFTG DETSMDHSGT 420 QATVPAVAAT AAGMSMPCDD VPVTSSSSDL PPQGTPQTPT FMWKED

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MDAPSGESGG GGGGGGGRRW KGKGVTPIQP RRQLGTVLED SSAALLRPLK KIGRSPDRLL  60
RSASSLSTSS SAPPSPRSSS ASDAPVRVIS SSPSSPSPPS ARHIFPFAYE ASTTTVGGSP  120
RLHPLSWQQS SMSQPASPQQ QQQQPLQHQQ MISFGASPPC STTQFVVPEN AQQQQMLLRY  180
WSEALNLSPR GGPGGVPPWL YQQLLRVPPP PQKLYRGVRQ RHWGKWVAEI RLPRNRTRLW  240
LGTFDTAEDA AMAYDREAFK LRGENARLNF PDRFLGKGRA GGSGRTSVSS SAAAAASCSS  300
SSPSPPETPD DANTQQQAPQ QREQRDTAGV SMGKKQPQPP APTSRQEGCS GGDAAAPYPA  360
EMLHAPAACG GMWVAPDESW FSTWGPGSSF WDDYDMDSAR GLFLHPRFTG DETSMDHSGT  420
QATVPAVAAT AAGMSMPCDD VPVTSSSSDL PPQGTPQTPT FMWKED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	1e-35	ERF family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G17660.1