PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G13890.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 1040aa    MW: 108677 Da    PI: 6.3365
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G13890.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-30565622260
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                      +Dgy+WrKYGqK+vk se+prsYY+Ct+a+C vkkkvers+ +++v+ei+Y+g+Hnh+k
  ONIVA04G13890.1 565 EDGYSWRKYGQKQVKHSEYPRSYYKCTHASCAVKKKVERSH-EGHVTEIIYKGTHNHPK 622
                      8****************************************.***************85 PP
2WRKY104.65.2e-33796854159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC v+k+ver+++d k v++tYeg+Hnhe
  ONIVA04G13890.1 796 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCLVRKHVERASHDLKSVITTYEGKHNHE 854
                      59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1040 aa     Download sequence    
MTMTTATLDP PPPPLLIAGS LLDDDRDAGS AASSSPRWLP WARGSTVGSP PRRGGEERGG  60
EAATRRKGNS SSPDDDDDCR NDEDDCRNDY DYRDDDVGAT TDGGGDTAAL LPMAMTTATT  120
MAPMPVEAAA DGGGELSSAG EGGQRRVNLL PAKILSAYEN HLFSQALACR WNACPPRKMD  180
LAPHLLQLMW HKALPPYRSF LVFGAHHLSL KNPCALFRLR LWSLWPLPIW EDEWIIEKLA  240
VLAARRSSFV SEESLCSVPA AALVSLAIAH LGEMEGDIAM EEWKDSNHRG ADYLMTMPMQ  300
NFLADAFPPP ELLEGEGGFE KHGLSVAVGS PPPTPPPPED GCSPLPLTPQ FGQKFGSGGG  360
GGGGSLADRR ARGGFSNVAR ISVPYNQPVA DVSSAGAPSP YVTIPPGLSP TTLLESPVFF  420
SNAMGQASPT TGKLHMLGGA NDSNPIRFES PPIEEGSGAF SFKPLNLASS QYAAAEKTKS  480
LPNNQHQSLP ISVKTEATSI QTAQDEAAAN QLMQPQFNGG KRSRAAPDNG GDGEGQPVEG  540
DAKADSSSGA AAVAVVAAAA AAVAEDGYSW RKYGQKQVKH SEYPRSYYKC THASCAVKKK  600
VERSHEGHVT EIIYKGTHNH PKPAASRRPP VHPPPPSPAT TTTTPLPPGD AQADHAPDGG  660
GGSTPVGAGQ AGAEWHNGGV VGGEGLVDAT SSPSVPGELC ESTASMQVHE GAAAAQLGES  720
PEGVDVTSAV SDEVDRDDKA THVLPLAAAA ADGESDELER KRRKLDSCAT MDMSTASRAV  780
REPRVVIQTT SEVDILDDGY RWRKYGQKVV KGNPNPRSYY KCTHPGCLVR KHVERASHDL  840
KSVITTYEGK HNHEVPAARN SGHPAGSASP GGGAGSSSQP HGVGVGGRRP EVPSVQESLM  900
RLGGGCGAAP FPPHFGLHLP PPPPRDPLAP MSNFPYSLGH APSPALRGLP PPPPPPPSAS  960
ALAVAGLGGV VEGLKYPMLA PPSVHSLLRH RQGGGMEAVV VPKAEVKQEA MPPAAAVAGA  1020
GRGAAVYQQA MSRVSLGNQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.14e-95WRKY family protein