PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G40360.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 241aa    MW: 25540.1 Da    PI: 11.1016
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G40360.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-1881130255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                      +++GVr+++ +gr++AeIrdp     +  +r +lg+f+taeeAa+a++aa  +l+g
  ONIVA03G40360.1  81 RFRGVRQRP-WGRFAAEIRDP-----HlrRRLWLGTFDTAEEAAAAYDAASVRLRG 130
                      69*******.**********8.....556**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MGTNPSLHEL AAGAAPRGRV VRILVRDADA TDSSSSEDEA VAVAQPRPRR RGKVGGGGGG  60
GGGVKRRVME AGAGEARPTA RFRGVRQRPW GRFAAEIRDP HLRRRLWLGT FDTAEEAAAA  120
YDAASVRLRG SSAATNFASV RCYSLPPELP KPTISPPEAA VRPITLPIGT AKPTLLPRVK  180
EEGESCGGRV KEEASSCEVQ VLAPEPMWTM ISGKRKKRSG CGTRVRAFHA VSARVEEVGG  240
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.14e-19ERF family protein