PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G37060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | HB-other | ||||||||
Protein Properties | Length: 208aa MW: 22025.2 Da PI: 10.6419 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 18.2 | 4.1e-06 | 143 | 186 | 12 | 50 |
HHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHH.HHHHHHH CS Homeobox 12 leeLeelFeknrypsaeereeLAkkl....gLterq.VkvWFqN 50 +e+Le++++++++p ++r++L +l +++ +q +kvWF ONIVA03G37060.1 143 VEALERVYAECPKPRFSRRQQLLCELsilaNIEPKQkIKVWFPK 186 689***********************99999987766*****65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MPPVLPSSTM MASSTLEEAA PARAAAGAPL LLLHPLVVTA AAGGGTPAES ATGSPSLLVL 60 PPLRPAAAVV AGGGQIRRPT PADPPSCPLP SLVAAVARSR LRVCRRCPSL MAASDRPPAQ 120 DCRTSSPVAA LPLRPLLRSF PTVEALERVY AECPKPRFSR RQQLLCELSI LANIEPKQKI 180 KVWFPKQKVS KSMQGYTIKL VCLLCVWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60690.1 | 6e-15 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G37060.1 |