PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G36680.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 269aa MW: 28292.8 Da PI: 8.1624

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G36680.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.9e-05	97	119	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ CgksFs+ L H +H ONIVA03G36680.1 97 FKCSVCGKSFSSYQALGGHKTSH 119 89**********99998888777 PP
2	zf-C2H2	13	0.0003	166	188	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F++ L H r+H ONIVA03G36680.1 166 HRCSICQKEFPTGQALGGHKRKH 188 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MSSASSMEAL HAAVLKEEQQ QHEVEEATVV TSSSATSGEE GGHLPQGWAK RKRSRRQRSE 60 EENLALCLLM LARGGHHRVQ APPPLSASAP PPAGAEFKCS VCGKSFSSYQ ALGGHKTSHR 120 VKLPTPPAAP VLAPAPVAAL LPSAEDREPA TSSTAASSDG MTNRVHRCSI CQKEFPTGQA 180 LGGHKRKHYD GGVGAGAGAS STELLATVAA ESEVGSSGNG QSATRAFDLN LPAVPEFVWR 240 PCSKGKKMWD EEEEVQSPLA FKKPRLLTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	3e-30	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G36680.1