PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G32050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C3H
Protein Properties Length: 749aa    MW: 79397.5 Da    PI: 7.0756
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G32050.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.63.7e-07311331526
                      --SGGGGTS--TTTTT-SS-SS CS
          zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      +C++f++ G C++Gd C +aHg
  ONIVA03G32050.1 311 PCPDFRK-GVCRRGDMCEYAHG 331
                      8******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 749 aa     Download sequence    
MNGTPISASA AAGVDGVGAA VALAAATKKS AAAAAAVAEM AKTLTVDTDD AFAGLLELAA  60
DDDAEGLRRA LERAPPAAAD EAGLWYGRRK VLEHRTPLMV AATYGSLAVL RLLLSLPSVD  120
VNRRCGSDGT TALHCAASGG SPSCVEAVKL LLAAGADADA TDASGYRPAD VISVPPKMFD  180
AKIALQDLLG CPKAGHGVLR VVTRAANSML SPVSSPTAED ARSPSAAVMM TTKFADLPRV  240
VTSEKKEYPV DPSLPDIKNS IYASDEFRMY SFKIRPCSRA YSHDWTECPF VHPGENARRR  300
DPRKYHYSCV PCPDFRKGVC RRGDMCEYAH GVFECWLHPA QYRTRLCKDG TSCNRRVCFF  360
AHTTDELRPL YVSTGSAVPS PRASATATME MAAAMGLMPG SPSSVSAVMS PFTPPMSPSG  420
NGMPPSLGWQ QPNVPTLHLP GSSLQSSRLR TSLSARDMPA DDYSLVQDID SQLINDLCYS  480
RIGSSTGNHR SRTKSLNPSN LDDLFSAEMV SSPRYSNADQ GGMFSPSHKA AFLNQFQQQQ  540
QALLSPINTV FSPKSVDNQQ LPSHSSLLQA SLGISSPGRM SPRCVESGSP MNSHLAAALA  600
QREKQQQTMR SLSSRDLGPS AARASGVVGS PLSSSWSKWG SPSGTPDWGV NGEELGKLRR  660
SSSFELRSGG DDPDLSWVHT LVKESPPEKQ VTTAESINSV GPSPLMPPSV SNGEGPSLNA  720
PLDGHDQAAV IGALLEQMQL DQHIGSLAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41900.10.0C3H family protein