PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G20710.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 266aa    MW: 28320.6 Da    PI: 5.4401
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G20710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.8e-20121171256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                       y+GVr ++ +g+W+AeIrdp+    r  r +lg+f+taeeAa+a+++a+++++g+
  ONIVA03G20710.1 121 VYRGVRHRP-WGKWAAEIRDPR----RaVRKWLGTFDTAEEAARAYDRAALEFRGA 171
                      69****888.**********82....48*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MAAARQDSCK TKLDERGGSH QAPSSARWIS SEQEHSIIVA ALRYVVSGCT TPPPEIVTVA  60
CGEACALCGI DGCLGCDFFG AEAAGNEEAV MATDYAAAAA AAAVAGGSGG KRVRRRRKKN  120
VYRGVRHRPW GKWAAEIRDP RRAVRKWLGT FDTAEEAARA YDRAALEFRG ARAKLNFPCS  180
EPLPMPSQRN GNGGDAVTAA TTTAEQMTPT LSPCSADAEE TTTPVDWQMG ADEAGSNQLW  240
DGLQDLMKLD EADTWFPPFS GAASSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111119KRVRRRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-21ERF family protein