PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G20030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bHLH | ||||||||
Protein Properties | Length: 252aa MW: 27918.5 Da PI: 5.7676 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.6 | 0.00013 | 37 | 86 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ ++erE+ R ++N+ f eL +l + + + Ka iL+ +++ +++L ONIVA03G20030.1 37 RKVHKSEREKLKRGHLNDLFGELGNMLEAD----RQSNGKACILTDTTRILRDL 86 678899*********************997....57788899999888888776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MVPSERGDVA TAIRPAAADK LVHGPISDKK CRKKVPRKVH KSEREKLKRG HLNDLFGELG 60 NMLEADRQSN GKACILTDTT RILRDLLSQV KSLRQENSTL QNESNYVTME RNELQDENGV 120 LRSEISDLQN ELRMRATGSP GWGHGATGSP LPVPPSPGTV FPSQQPMQPS PMTTSTVFPL 180 QQPLPQPTVI EPSARQPLEL KLFLEAPPAE DPEPSEDQEA PNNVARPQPR YPTEASSWPI 240 SLGLPRMEDE QM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 2e-29 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G20030.1 |