PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA03G16920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 392aa MW: 42172.6 Da PI: 8.814 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 173.9 | 4.7e-54 | 9 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeel+v+yL+++++++++++ ++i++vdiyk++PwdLp+k++ +++ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk+++s ONIVA03G16920.1 9 LPPGFRFHPTDEELIVHYLRNRAASSPCPV-SIIADVDIYKFDPWDLPSKANYGDREWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHS 101 79****************************.89***************999999**************************************** PP NAM 95 k....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++e vg+kk Lvfykgr pkg+kt+W+mheyrl ONIVA03G16920.1 102 SggaaTNESVGVKKALVFYKGRPPKGTKTNWIMHEYRL 139 977776777***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 392 aa Download sequence |
MVLSNPAMLP PGFRFHPTDE ELIVHYLRNR AASSPCPVSI IADVDIYKFD PWDLPSKANY 60 GDREWYFFSP RDRKYPNGIR PNRAAGSGYW KATGTDKPIH SSGGAATNES VGVKKALVFY 120 KGRPPKGTKT NWIMHEYRLA AADAHAANTY RPMKFRNTSM RLDDWVLCRI YKKSSHASPL 180 AVPPLSDHEQ DEPCALEENA PLYAPSSSSA ASMILQGAAA GAFPSLHAAA AATQRTAMQK 240 IPSISDLLNE YSLSQLFDDG GAAAAAPLQE MARQPDHHHH HQQQHALFGH PVMNHFIANN 300 SMVQLAHLDP SSSAAPSTSA GAVVEPPAVT GKRKRSSDGG EPTIQALPPA AAAAKKPNGS 360 CVGATFQIGS ALQGSSLGLS HQMLLHSNMG MN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G04070.1 | 4e-86 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA03G16920.1 |